BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034C11SP1|AL429882
(846 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1270 1523 0.0
>3x_Contig1270
Length = 7505
Score = 1523 bits (767), Expect = 0.0
Identities = 827/847 (97%), Gaps = 1/847 (0%)
Strand = Plus / Plus
Query: 1 gatccattgggagcatatttaatcaaagtgtttgaaatattagacctgttgaacttctac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 925 gatccattgggagcatatttaatcaaagtgtttgaaatattagacctgttgaacttctac 984
Query: 61 attacacagccgatgagaggcgaaacgatctctaagactttgaatgaggatttggtcgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 985 attacacagccgatgagaggcgaaacgatctctaagactttgaatgaggatttggtcgtt 1044
Query: 121 agtgaggagaccattgtttgtatcaatgacagctacaggatatatatcaagggaattcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1045 agtgaggagaccattgtttgtatcaatgacagctacaggatatatatcaagggaattcaa 1104
Query: 181 tggttagtagaatcgatcagtgaaaggaatggcaactgtcctcacctggcactagagttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1105 tggttagtagaatcgatcagtgaaaggaatggcaactgtcctcacctggcactagagttg 1164
Query: 241 attgaattcactagaaaatgtgccattgaagatgaggtggatttcactgctagcgaagat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1165 attgaattcactagaaaatgtgccattgaagatgaggtggatttcactgctagcgaagat 1224
Query: 301 atcttactgcaagacgttgccattgtggaagtagaggaagaatacgttgacctgttgcat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1225 atcttactgcaagacgttgccattgtggaagtagaggaagaatacgttgacctgttgcat 1284
Query: 361 gattggtctgcgatcctggtgcagaaacaaacagaaatgaaggagttgttctcagaggac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1285 gattggtctgcgatcctggtgcagaaacaaacagaaatgaaggagttgttctcagaggac 1344
Query: 421 tcaaagagatgggcttcaatgactaaaccggtcaagaagtaggtgagggtatcctacacg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1345 tcaaagagatgggcttcaatgactaaaccggtcaagaagtaggtgagggtatcctacacg 1404
Query: 481 ttcgcacatatttgtatatatatatatatagamyatagaatatcaaattaaaaagttaca 540
|| ||||||||||||||||||||||||||| | |||||| | |||||||||||||| |
Sbjct: 1405 tttgcacatatttgtatatatatatatataaaatatagaaaaaaaaattaaaaagttata 1464
Query: 541 tacagttcgtcatacaggtctcatgtcatgatggaatgttcttctgccaactgggatgga 600
|| |||| || ||| |||| | |||| ||||||||||||| || ||| || |||||||||
Sbjct: 1465 tatagtttgttatataggtgttatgttatgatggaatgtttttttgctaattgggatgga 1524
Query: 601 gtcttcttcttctgcctgct-tttgatttctcgaatacttggagcgtctttgttcttcaa 659
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1525 gtcttcttcttctgcctgctgtttgatttctcgaatacttggagcgtctttgttcttcaa 1584
Query: 660 tgataacgaataatcgtcatatgaatccatatacttagagaaatagaggtaaagttgtgc 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1585 tgataacgaataatcgtcatatgaatccatatacttagagaaatagaggtaaagttgtgc 1644
Query: 720 taaggtcatacagcagggcgatccgttgttatatctgttgttacccacgcgtaagttttc 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1645 taaggtcatacagcagggcgatccgttgttatatctgttgttacccacgcgtaagttttc 1704
Query: 780 aataacgcgtacagctttccttctggtgatgtcaagcgggaggttaaacctcgaaggttc 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1705 aataacgcgtacagctttccttctggtgatgtcaagcgggaggttaaacctcgaaggttc 1764
Query: 840 acgaaga 846
|||||||
Sbjct: 1765 acgaaga 1771
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 11,091
Number of Sequences: 1807
Number of extensions: 11091
Number of successful extensions: 1245
Number of sequences better than 1.0e-20: 1
length of query: 846
length of database: 10,358,551
effective HSP length: 16
effective length of query: 830
effective length of database: 10,329,639
effective search space: 8573600370
effective search space used: 8573600370
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)